STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MRPS3628S ribosomal protein S36, mitochondrial. (107 aa)    
Predicted Functional Partners:
MRPS23
28S ribosomal protein S23, mitochondrial.
   
 
 0.841
MRPS27
28S ribosomal protein S27, mitochondrial.
     
 0.801
MRPS21
28S ribosomal protein S21, mitochondrial.
   
 0.789
PTCD3
Pentatricopeptide repeat domain-containing protein 3, mitochondrial.
     
 0.769
MRPS15
28S ribosomal protein S15, mitochondrial; Belongs to the universal ribosomal protein uS15 family.
   
 0.769
MRPS5
28S ribosomal protein S5, mitochondrial; Belongs to the universal ribosomal protein uS5 family.
     
 0.761
DAP3
28S ribosomal protein S29, mitochondrial.
    
 0.757
MRPS35
28S ribosomal protein S35, mitochondrial.
   
 
 0.748
MRPS10
28S ribosomal protein S10, mitochondrial.
   
 
 0.743
MRPS18A
28S ribosomal protein S18a, mitochondrial.
   
 0.739
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.