STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HSPA5Glucose-regulated protein; Belongs to the heat shock protein 70 family. (651 aa)    
Predicted Functional Partners:
HSP90B1
Endoplasmin.
   
 0.999
EIF2AK3
Eukaryotic translation initiation factor 2-alpha kinase 3.
    
 0.998
ATF6
Cyclic AMP-dependent transcription factor ATF-6 alpha.
    
 0.998
PDIA6
Protein disulfide-isomerase A6; Belongs to the protein disulfide isomerase family.
   
 0.996
HYOU1
Hypoxia up-regulated protein 1.
   
 
 0.994
PDIA3
Protein disulfide-isomerase.
   
 0.994
DNAJB11
DnaJ subfamily B member 11.
 
 0.993
PDIA4
Protein disulfide-isomerase.
   
 0.993
CALR
Calreticulin.
   
 0.985
MANF
Mesencephalic astrocyte-derived neurotrophic factor.
   
 
 0.984
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
Server load: medium (50%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.