Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SLC39A12Zinc transporter ZIP12. (666 aa)    
Predicted Functional Partners:
SLC30A4
Zinc transporter 4.
   
 0.726
SLC30A10
Zinc transporter 10.
  
 0.722
SLC39A11
Zinc transporter ZIP11.
    
 
 0.707
SLC16A8
Monocarboxylate transporter 3.
      
 0.705
SLC30A9
Zinc transporter 9.
     
 0.697
NSUN6
Putative methyltransferase NSUN6; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.
      
 0.695
SLC30A6
Zinc transporter 6.
  
 0.690
AGBL5
Cytosolic carboxypeptidase-like protein 5.
      
 0.675
SLC39A9
Zinc transporter ZIP9.
    
 
 0.660
SLC39A3
Zinc transporter ZIP3.
   
 0.623
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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