STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FAM3CProtein FAM3C. (259 aa)    
Predicted Functional Partners:
ENSLSDP00000009175
annotation not available
     
 0.629
DAG1
Dystroglycan.
     
 0.629
POMT1
Protein O-mannosyl-transferase 1.
      
 0.522
FKTN
Fukutin.
      
 0.521
POMT2
Protein O-mannosyl-transferase 2.
      
 0.521
POMGNT2
Protein O-linked-mannose beta-1,4-N-acetylglucosaminyltransferase 2.
      
 0.509
POMK
Protein O-mannose kinase.
    
 
 0.485
B3GALNT2
Hexosyltransferase.
    
 
 0.461
DPM1
Dolichol-phosphate mannosyltransferase subunit 1; Transfers mannose from GDP-mannose to dolichol monophosphate to form dolichol phosphate mannose (Dol-P-Man) which is the mannosyl donor in pathways leading to N-glycosylation, glycosyl phosphatidylinositol membrane anchoring, and O-mannosylation of proteins.
      
 0.448
RXYLT1
Transmembrane protein 5.
    
 
 0.447
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.