STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZDHHC5Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family. (668 aa)    
Predicted Functional Partners:
GOLGA7B
Golgin subfamily A member 7B.
    
 0.648
GOLGA7
Golgin subfamily A member 7.
    
 0.648
ZDHHC1
Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.
     
0.515
WRN
Werner syndrome ATP-dependent helicase.
    
 0.497
TANGO2
Transport and Golgi organization protein 2.
      
 0.495
BRD1
Bromodomain-containing protein 1.
   
  
 0.480
POT1
Protection of telomeres protein 1.
    
 0.472
MRPL40
39S ribosomal protein L40, mitochondrial.
      
 0.463
TCF20
Transcription factor 20.
      
 0.461
LOC110476220
Uncharacterized protein.
    
 0.456
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.