STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBX3Pre-B-cell leukemia transcription factor 3. (433 aa)    
Predicted Functional Partners:
HOXC9
Homeobox protein; Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis. Belongs to the Abd-B homeobox family.
    
 
 0.769
HOXB3
Homeobox protein Hox-B3.
    
 0.753
ENSLSDP00000023599
annotation not available
   
 0.750
MEIS2
Homeobox protein Meis2.
   
0.750
HOXB6
Homeobox protein Hox-B6.
    
 0.708
PKNOX1
Homeobox protein PKNOX1.
    
0.702
PKNOX2
Homeobox protein PKNOX2.
    
0.625
HOXB7
Homeobox protein HoxA/B7.
    
 0.614
HOXC8
Homeobox protein Hox-C8.
    
 0.607
HOXB8
Homeobox protein Hox-B8.
    
 0.607
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
Server load: medium (62%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.