STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FABP6Gastrotropin. (128 aa)    
Predicted Functional Partners:
NR1H4
Bile acid receptor.
   
 0.753
FABP2
Fatty acid-binding protein, intestinal; Belongs to the calycin superfamily. Fatty-acid binding protein (FABP) family.
     
0.649
LOC110473085
Bile acid receptor.
   
 0.622
SLC10A1
Sodium/bile acid cotransporter.
   
  
 0.545
NR0B2
Nuclear receptor subfamily 0 group B member 2.
    
 0.534
CYP7A1
Cholesterol 7-alpha-monooxygenase; Belongs to the cytochrome P450 family.
   
 
 0.474
BCO1
Beta,beta-carotene 15,15'-monooxygenase.
      
 0.451
GOT2
Aspartate aminotransferase.
   
 
 0.436
SLC10A2
Ileal sodium/bile acid cotransporter.
   
  
 0.434
SLC51A
Organic solute transporter subunit alpha.
   
  
 0.425
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
Server load: medium (46%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.