STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C1QTNF2Complement C1q tumor necrosis factor-related protein 2. (284 aa)    
Predicted Functional Partners:
ENSLSDP00000011214
annotation not available
  
 
  0.552
ENSLSDP00000015473
annotation not available
  
     0.536
ENSLSDP00000016401
annotation not available
  
 
  0.531
ENSLSDP00000016397
annotation not available
  
 
  0.525
ENSLSDP00000001381
annotation not available
  
     0.524
ENSLSDP00000001401
annotation not available
  
     0.524
ENSLSDP00000009358
annotation not available
  
 
  0.507
RLOC_00001804
Uncharacterized protein.
  
     0.492
ENSLSDP00000002133
annotation not available
  
     0.487
ENSLSDP00000002137
annotation not available
  
     0.487
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.