STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CNTFCiliary neurotrophic factor. (195 aa)    
Predicted Functional Partners:
CNTFR
Ciliary neurotrophic factor receptor subunit alpha.
    
 0.994
LIFR
Leukemia inhibitory factor receptor.
    
 0.989
IL6ST
Interleukin-6 receptor subunit beta.
    
 0.956
IL6R
Interleukin-6 receptor subunit alpha.
    
 0.816
CLCF1
Cardiotrophin-like cytokine factor 1.
  
  
 0.783
IL11RA
Interleukin-11 receptor subunit alpha.
  
 
 0.765
EBI3
Epstein-Barr virus induced 3.
    
 0.717
GDNF
Glial cell line-derived neurotrophic factor.
      
 0.672
SHH
Hedgehog protein; Intercellular signal essential for a variety of patterning events during development.
      
 0.672
BDNF
Brain-derived neurotrophic factor; Promotes the survival of neuronal populations that are all located either in the central nervous system or directly connected to it; Belongs to the NGF-beta family.
      
 0.672
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.