Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LEAP2Liver-expressed antimicrobial peptide 2. (77 aa)    
Predicted Functional Partners:
GHSR
Growth hormone secretagogue receptor type 1; Belongs to the G-protein coupled receptor 1 family.
    
 
 0.585
ERH
Enhancer of rudimentary homolog; May have a role in the cell cycle.
      
 0.532
PACS2
Phosphofurin acidic cluster sorting protein 2.
    
   0.519
SPP2
Secreted phosphoprotein 24.
   
  
 0.445
CAMP
Cathelicidin antimicrobial peptide.
      
 0.411
GUCD1
Protein GUCD1.
      
 0.411
LONRF3
LON peptidase N-terminal domain and RING finger protein 3.
      
 0.408
C16orf72
UPF0472 protein C16orf72.
      
 0.408
LOC110478284
Antimicrobial peptide NK-lysin.
      
 0.408
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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