Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
DYMDymeclin. (525 aa)    
Predicted Functional Partners:
BCKDHB
2-oxoisovalerate dehydrogenase subunit beta, mitochondrial.
      
 0.732
HHIP
Hedgehog-interacting protein.
      
 0.730
KCNT1
Potassium channel subfamily T member 1.
      
 0.666
UNC79
Protein unc-79.
      
 0.640
CTIF
CBP80/20-dependent translation initiation factor.
      
 0.602
PPP6R2
Serine/threonine-protein phosphatase 6 regulatory subunit 2.
   
  
 0.594
PPP6R3
Serine/threonine-protein phosphatase 6 regulatory subunit 3.
   
  
 0.594
WDR48
WD repeat-containing protein 48.
      
 0.594
MYO16
Unconventional myosin-XVI; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
      
 0.574
TSPAN4
Tetraspanin.
      
 0.573
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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