Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
FAM207AProtein FAM207A. (181 aa)    
Predicted Functional Partners:
LTV1
Protein LTV1.
    
 0.917
BYSL
Bystin.
    
 0.914
RRP12
RRP12-like protein.
    
 
 0.876
BUD23
Putative 18S rRNA (Guanine-N(7))-methyltransferase.
    
   0.855
PARN
Poly(A)-specific ribonuclease PARN.
    
   0.854
UTP14A
U3 small nucleolar RNA-associated protein 14 A.
    
   0.835
NOB1
RNA-binding protein NOB1; May play a role in mRNA degradation. Belongs to the NOB1 family.
    
 0.820
NOP14
Nucleolar protein 14.
    
  0.796
TSR1
Pre-rRNA-processing protein TSR1.
    
 0.769
PNO1
RNA-binding protein PNO1.
   
   0.756
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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