STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LRFN1Leucine-rich repeat and fibronectin type III domain-containing protein 1. (644 aa)    
Predicted Functional Partners:
ADGRL3
Latrophilin-3; Belongs to the G-protein coupled receptor 2 family.
    
   0.717
ADGRL2
Latrophilin-2; Belongs to the G-protein coupled receptor 2 family.
    
   0.717
PTPRD
Receptor-type tyrosine-protein phosphatase delta.
   
 0.674
PTPRS
Receptor-type tyrosine-protein phosphatase S.
   
 0.590
LRFN2
Leucine-rich repeat and fibronectin type-III domain-containing protein 2.
  
  
0.576
PTPRF
Receptor-type tyrosine-protein phosphatase F.
   
 0.571
GRIN1
Glutamate receptor ionotropic, NMDA 1.
   
 0.469
LRRC10B
Leucine-rich repeat-containing protein 10B.
  
     0.442
PIDD1-2
Leucine-rich repeats and death domain-containing protein.
  
 
  0.439
FLOT1
Flotillin 1.
     
 0.437
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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