Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
SYCNSyncollin. (135 aa)    
Predicted Functional Partners:
RXFP3
Relaxin-3 receptor 1.
      
 0.872
INPP5D
Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 1.
      
 0.700
CLPS
Colipase.
   
  
 0.689
LOC110471057
C-C chemokine receptor type 5; Belongs to the G-protein coupled receptor 1 family.
      
 0.657
LOC110477408
L-gulonolactone oxidase-like.
      
 0.569
PIGR
Polymeric immunoglobulin receptor.
      
 0.567
PTPLAD2
Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase; Catalyzes the third of the four reactions of the long-chain fatty acids elongation cycle. This endoplasmic reticulum-bound enzymatic process, allows the addition of two carbons to the chain of long- and very long-chain fatty acids/VLCFAs per cycle. This enzyme catalyzes the dehydration of the 3-hydroxyacyl-CoA intermediate into trans-2,3-enoyl-CoA, within each cycle of fatty acid elongation. Thereby, it participates to the production of VLCFAs of different chain lengths that are involved in multiple biological processes as precursors [...]
      
 0.545
ADARB1
Double-stranded RNA-specific editase 1.
      
 0.544
ADARB2
Double-stranded RNA-specific editase B2.
      
 0.544
ENSLSDP00000019075
annotation not available
      
 0.529
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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