STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSLSDP00000005611annotation not available (767 aa)    
Predicted Functional Partners:
DST
Dystonin.
 
     0.917
MACF1_0
Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5.
 
      0.891
MACF1
Microtubule-actin cross-linking factor 1.
 
     0.690
ITGB4
Integrin beta.
   
 0.685
JUP
Junction plakoglobin.
   
 0.614
ITSN2
Intersectin-2.
    
 0.585
DSC1
Desmocollin-3; Component of intercellular desmosome junctions. Involved in the interaction of plaque proteins and intermediate filaments mediating cell-cell adhesion.
   
 0.559
CTNNB1
Catenin beta-1.
    
 0.521
EPPK1
Epiplakin.
 
    
 0.496
SPTAN1
Spectrin alpha chain, non-erythrocytic 1.
 
 
 0.490
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.