STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC110471723Ribonuclease CL2; Belongs to the pancreatic ribonuclease family. (144 aa)    
Predicted Functional Partners:
TEK
Angiopoietin-1 receptor.
   
 
 0.466
TIE1-2
Tyrosine-protein kinase receptor Tie-1.
   
 
 0.466
TIE1
Tyrosine-protein kinase receptor Tie-1.
   
 
 0.466
TRIM14
Tripartite motif-containing protein 14.
   
   0.434
CIITA
MHC class II transactivator.
   
   0.434
NOD1
Nucleotide-binding oligomerization domain-containing protein 1.
   
   0.434
NLRX1
NLR family member X1.
   
   0.434
NLRC3
Protein NLRC3.
   
   0.434
NLRP3
NACHT, LRR and PYD domains-containing protein 3.
   
   0.434
RNH1
Ribonuclease inhibitor.
   
   0.434
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.