Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
PRAG1Tyrosine-protein kinase SgK223. (1343 aa)    
Predicted Functional Partners:
YWHAE
14-3-3 protein epsilon; Belongs to the 14-3-3 family.
    
   0.764
RND2
Rho-related GTP-binding protein RhoN.
     
 0.732
FAM20A
Protein FAM20A.
      
 0.600
GRB2
Growth factor receptor-bound protein 2.
    
 0.595
RUFY1
RUN and FYVE domain-containing protein 1.
      
 0.566
KCNJ4
Inward rectifier potassium channel 4.
      
 0.541
CSK
Tyrosine-protein kinase.
    
 0.538
MATK
Tyrosine-protein kinase.
    
 0.538
PPP1R3B
Protein phosphatase 1 regulatory subunit.
    
 
 0.530
TRRAP
Transformation/transcription domain-associated protein; Belongs to the PI3/PI4-kinase family.
      
 0.515
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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