STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSLSDP00000005645annotation not available (96 aa)    
Predicted Functional Partners:
MAD2L1
Mitotic spindle assembly checkpoint protein MAD2A.
   
 0.956
BUB3
Mitotic checkpoint protein BUB3.
   
 0.925
CDC27
Cell division cycle protein 27.
    
 0.917
CDC23
Cell division cycle protein 23.
    
 0.916
CDC16
Cell division cycle protein 16.
   
 0.913
NDC80
Kinetochore protein NDC80.
   
 0.908
ANAPC1
Anaphase-promoting complex subunit 1.
   
 0.894
ANAPC5
Anaphase-promoting complex subunit 5.
    
 0.893
ANAPC4
Anaphase-promoting complex subunit 4; Component of the anaphase promoting complex/cyclosome (APC/C), a cell cycle-regulated E3 ubiquitin ligase that controls progression through mitosis and the G1 phase of the cell cycle. Belongs to the APC4 family.
    
 0.888
ANAPC2
Anaphase-promoting complex subunit 2; Belongs to the cullin family.
    
 0.885
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.