Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
BHLHA15Class A basic helix-loop-helix protein 15. (153 aa)    
Predicted Functional Partners:
ZFAND3
AN1-type zinc finger protein 3.
      
 0.543
TESC
Calcineurin B ous protein 3.
      
 0.515
RPL26L1
60S ribosomal protein L26.
    
   0.505
LMAN1
Protein ERGIC-53.
      
 0.458
ID2
DNA-binding protein inhibitor ID-2.
    
 
 0.450
ZNF512B
Zinc finger protein 512B.
    
 
 0.450
BHLHE41
Class E basic helix-loop-helix protein 41.
    
 0.442
CTCF
Transcriptional repressor CTCF.
    
 
 0.429
RPL36AL
60S ribosomal protein L36a; Belongs to the eukaryotic ribosomal protein eL42 family.
    
   0.403
PTP4A3
Protein tyrosine phosphatase type IVA 3.
      
 0.403
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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