Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
PRIMA1Proline-rich membrane anchor 1. (208 aa)    
Predicted Functional Partners:
KCNS1
Potassium voltage-gated channel subfamily S member 1; Belongs to the potassium channel family.
      
 0.816
CABP1
Calcium-binding protein 1.
      
 0.568
CABP2
Calcium-binding protein 2.
      
 0.568
CUNH1orf43
Uncharacterized protein C1orf43.
      
 0.556
TTC7B
Tetratricopeptide repeat protein 7B.
      
 0.543
GLIPR2
Golgi-associated plant pathogenesis-related protein 1; Belongs to the CRISP family.
      
 0.471
SH3BP2
SH3 domain-binding protein 2.
      
 0.452
SIPA1L1
Signal-induced proliferation-associated 1-like protein 1.
      
 0.432
PPP1R16B
Protein phosphatase 1 regulatory inhibitor subunit 16B.
      
 0.427
DDX24
ATP-dependent RNA helicase DDX24; Belongs to the DEAD box helicase family.
      
 0.408
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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