Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KCNV1Potassium voltage-gated channel subfamily V member 1; Belongs to the potassium channel family. (366 aa)    
Predicted Functional Partners:
ENSLSDP00000008068
annotation not available
   
  0.770
KCNG3
Potassium voltage-gated channel subfamily G member 3; Belongs to the potassium channel family.
    
  0.765
KCNAB1
Voltage-gated potassium channel subunit beta-1.
   
 0.683
KCNAB2
Voltage-gated potassium channel subunit beta-2.
   
 0.683
PARD6A
Partitioning defective 6 alpha.
      
 0.664
TAFA1
Protein FAM19A1.
   
  
 0.633
CACNG1
Voltage-dependent calcium channel gamma-1 subunit; Regulatory subunit of the voltage-gated calcium channel that gives rise to L-type calcium currents in skeletal muscle. Regulates channel inactivation kinetics.
      
 0.574
F13B
Abnormal spindle-like microcephaly-associated.
      
 0.568
LOC110479638
Potassium channel subfamily K member 16-like.
   
  
 0.542
KCNV2
Potassium voltage-gated channel subfamily V member 2; Belongs to the potassium channel family.
    
  0.530
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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