STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OGFROpioid growth factor receptor. (691 aa)    
Predicted Functional Partners:
APC
Adenomatous polyposis coli protein.
    
 0.905
ENSLSDP00000002896
Frequently rearranged in advanced T-cell lymphomas 2.
    
 0.888
CSNK1A1
Casein kinase I isoform alpha; Belongs to the protein kinase superfamily.
   
 0.800
AMER1
APC membrane recruitment protein 1.
     
 0.734
BTRC
F-box/WD repeat-containing protein 1A.
    
 0.732
SKP1
S-phase kinase-associated protein 1; Belongs to the SKP1 family.
    
 0.732
FBXW11
F-box/WD repeat-containing protein 11.
    
 0.732
UCK1
Uridine-cytidine kinase; Belongs to the uridine kinase family.
    
 0.725
UCKL1
Uridine-cytidine kinase; Belongs to the uridine kinase family.
    
 0.725
JUP
Junction plakoglobin.
    
 0.725
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.