STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EMC2ER membrane protein complex subunit 2. (297 aa)    
Predicted Functional Partners:
EMC3
ER membrane protein complex subunit 3; Belongs to the EMC3 family.
   
 0.995
EMC1
ER membrane protein complex subunit 1.
   
 0.993
EMC4
ER membrane protein complex subunit 4.
   
 
 0.991
EMC6
ER membrane protein complex subunit 6.
   
 
 0.990
MMGT1
Membrane magnesium transporter 1.
    
 0.971
EMC8
ER membrane protein complex subunit 8.
   
 0.969
EMC7
ER membrane protein complex subunit 7.
   
 
 0.956
DCTN4
Dynactin subunit 4.
    
 
 0.917
SEC63
Translocation protein SEC63.
    
 
 0.659
SRP54
Signal recognition particle 54 kDa protein; Binds to the signal sequence of presecretory protein when they emerge from the ribosomes and transfers them to TRAM (translocating chain-associating membrane protein). Belongs to the GTP-binding SRP family. SRP54 subfamily.
    
 
 0.578
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.