Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
NTSR1Neurotensin receptor type 1; Belongs to the G-protein coupled receptor 1 family. (555 aa)    
Predicted Functional Partners:
NTS
Neurotensin/neuromedin N.
    
 0.999
GNA11
Guanine nucleotide-binding protein subunit alpha-11.
    
 0.839
LOC110470681
Guanine nucleotide-binding protein G(Q) subunit alpha.
    
 0.839
EVA1B
Protein eva-1 B.
      
 0.836
NMU
Neuromedin-U.
    
 0.767
MLN
Promotilin.
    
 0.680
RIC8B
Synembryn-B.
      
 0.582
RIC8A
Synembryn-A.
      
 0.576
AFTPH
Aftiphilin.
      
 0.576
DHX15
Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15.
     
 0.574
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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