STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EXTL3Exostosin-like 3; Belongs to the glycosyltransferase 47 family. (919 aa)    
Predicted Functional Partners:
EXTL2
Exostosin-like 2.
    
0.910
HS2ST1
Heparan sulfate 2-O-sulfotransferase 1.
      
 0.575
MGAT2
Alpha-1,6-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase.
      
 0.563
GLCE
Heparosan-N-sulfate-glucuronate 5-epimerase.
      
 0.551
UXS1
UDP-glucuronic acid decarboxylase 1.
      
 0.550
SLC35B2
Adenosine 3'-phospho 5'-phosphosulfate transporter 1.
      
 0.540
FUT8
Alpha-(1,6)-fucosyltransferase; Catalyzes the addition of fucose in alpha 1-6 linkage to the first GlcNAc residue, next to the peptide chains in N-glycans. Belongs to the glycosyltransferase 23 family.
      
 0.524
B4GALT7
Beta-1,4-galactosyltransferase 7.
      
 0.521
NDST1
Bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 1.
   
  
 0.489
UGDH
UDP-glucose 6-dehydrogenase; Involved in the biosynthesis of glycosaminoglycans; hyaluronan, chondroitin sulfate, and heparan sulfate. Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.
      
 0.481
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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