Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
EXTL3Exostosin-like 3; Belongs to the glycosyltransferase 47 family. (919 aa)    
Predicted Functional Partners:
EXTL2
Exostosin-like 2.
    
0.968
EXT2
Exostosin-2; Belongs to the glycosyltransferase 47 family.
    
0.949
EXT1
Exostosin-1; Belongs to the glycosyltransferase 47 family.
   
0.939
EXTL1
Exostosin-1c; Belongs to the glycosyltransferase 47 family.
   
0.939
UXS1
UDP-glucuronic acid decarboxylase 1.
      
 0.723
SDC2
Syndecan; Cell surface proteoglycan; Belongs to the syndecan proteoglycan family.
     
 0.697
CSGALNACT1
Hexosyltransferase.
   
  
 0.684
B4GALT7
Beta-1,4-galactosyltransferase 7.
      
 0.663
GPC6
Glypican-6; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family.
     
 0.658
GPC4
Glypican-4; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family.
     
 0.658
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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