STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
STAG2Cohesin subunit SA-2. (1048 aa)    
Predicted Functional Partners:
SMC3
Structural maintenance of chromosomes protein.
   
 0.910
NIPBL
Nipped-B protein.
   
 0.879
SMC1B
Structural maintenance of chromosomes protein.
   
 0.861
PDS5B
Sister chromatid cohesion protein PDS5 B.
   
 0.850
SMC1A
Structural maintenance of chromosomes protein 1A.
   
 0.836
PDS5A
Sister chromatid cohesion protein PDS5 A.
   
 0.830
RAD21
Double-strand-break repair protein rad21.
   
 0.781
ENSLSDP00000008842
annotation not available
   
 0.781
RAD21L1
Double-strand-break repair protein rad21-like protein 1.
   
 0.781
SMC6
Structural maintenance of chromosomes protein 6.
   
 0.730
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.