Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene fusion
Co-occurrence
Co-expression
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[Homology]
Score
CRYMKetimine reductase mu-crystallin. (314 aa)    
Predicted Functional Partners:
L3HYPDH
Trans-3-hydroxy-L-proline dehydratase.
    
 0.852
BBS4
Bardet-Biedl syndrome 4 protein.
      
 0.810
IFT80
Intraflagellar transport protein 80.
      
 0.798
IFT81
Intraflagellar transport protein 81.
      
 0.797
CRAMP1
Protein cramped-like.
      
 0.792
KIF3A
Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
      
 0.792
ARG2
Arginase.
    
 0.778
AGMAT
Agmatinase, mitochondrial.
    
 0.778
RAI1
Retinoic acid-induced protein 1.
      
 0.719
BBS9
Protein PTHB1.
      
 0.718
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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