Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CFAP298UPF0769 protein C21orf59. (296 aa)    
Predicted Functional Partners:
DNAAF4
Dyslexia susceptibility 1 candidate gene 1.
      
 0.716
CFAP300
Uncharacterized protein C11orf70.
    
 
 0.713
LRRC6
Protein tilB.
      
 0.688
GTF2A1L
TFIIA-alpha and beta-like factor.
      
 0.688
DNAAF5
Dynein assembly factor 5, axonemal.
      
 0.675
ZMYND10
Zinc finger MYND domain-containing protein 10.
      
 0.675
DNAAF1
Dynein assembly factor 1, axonemal.
      
 0.664
WDR92
WD repeat-containing protein 92.
  
   
 0.640
CFAP20
Cilia-and flagella-associated protein 20.
      
 0.595
USP16
Ubiquitin carboxyl-terminal hydrolase 16; Specifically deubiquitinates 'Lys-120' of histone H2A (H2AK119Ub), a specific tag for epigenetic transcriptional repression, thereby acting as a coactivator. Deubiquitination of histone H2A is a prerequisite for subsequent phosphorylation at 'Ser-11' of histone H3 (H3S10ph), and is required for chromosome segregation when cells enter into mitosis. Regulates Hox gene expression via histone H2A deubiquitination. Prefers nucleosomal substrates. Does not deubiquitinate histone H2B.
      
 0.591
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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