Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ABCC10Multidrug resistance-associated protein 7. (1537 aa)    
Predicted Functional Partners:
ZNF318
Zinc finger protein 318.
   
 
 0.585
VWC2L
Von Willebrand factor C domain-containing protein 2-like.
      
 0.575
ABCG5
ATP-binding cassette sub-family G member 5.
   
 0.551
UBE2V1
Ubiquitin-conjugating enzyme E2 variant 1.
     
  0.473
INO80C
INO80 complex subunit C.
      
 0.457
LOC110473306-2
E3 ubiquitin-protein ligase RNF103.
    
 
 0.455
RBM42
RNA-binding protein 42.
      
 0.455
BARD1
BRCA1-associated RING domain protein 1.
   
 0.452
BMS1
Ribosome biogenesis protein BMS1.
      
 0.437
NSMCE2
E3 SUMO-protein ligase NSE2.
      
 0.433
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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