STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TCF3Transcription factor E2-alpha. (667 aa)    
Predicted Functional Partners:
TAL1
T-cell acute lymphocytic leukemia protein 1.
    
 0.819
MYOD1
Myogenic factor.
    
 0.751
LMO2
Rhombotin-2.
    
 0.698
CTNNB1
Catenin beta-1.
    
 0.693
MYF5
Myogenic factor.
    
 0.685
ASCL2
Achaete-scute 2.
   
 0.658
ASCL1
Achaete-scute 1.
   
 0.658
MYOG
Myogenin.
   
 0.641
ATOH1
Protein atonal 1.
    
 
 0.611
TCF21
Transcription factor 21.
    
 0.607
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.