Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ZP2Zona pellucida sperm-binding protein 2. (690 aa)    
Predicted Functional Partners:
ENSLSDP00000008350
annotation not available
   
 0.766
LOC110472685
Zona pellucida sperm-binding protein 3.
   
 0.766
PLP1
Myelin proteolipid protein.
      
 0.665
GDF9
Growth/differentiation factor 9.
   
 0.646
TNNC2
Troponin C, skeletal muscle.
   
 
 0.616
SPAM1
Hyaluronidase.
    
 0.592
CHIA
Acidic mammalian chitinase; Belongs to the glycosyl hydrolase 18 family.
   
 0.583
LOC110476233
Pancreatic secretory granule membrane major glycoprotein GP2.
   
 
 0.546
BMP15
Bone morphogenetic protein 15.
   
 0.475
AMH
Muellerian-inhibiting factor.
    
 0.469
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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