Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TMEM159Promethin-A. (156 aa)    
Predicted Functional Partners:
KCTD9
BTB/POZ domain-containing protein KCTD9.
      
 0.794
ENSLSDP00000014524
annotation not available
      
 0.720
CACFD1
Calcium channel flower.
    
   0.717
RSPH1
Radial spoke head 1.
      
 0.690
CALCRL
Calcitonin gene-related peptide type 1 receptor; Belongs to the G-protein coupled receptor 2 family.
      
 0.588
ENSLSDP00000000248
annotation not available
      
 0.587
CCP110
UPF0505 protein C16orf62.
      
 0.580
CRIM1
Cysteine-rich motor neuron 1 protein.
      
 0.565
EDC4
Enhancer of mRNA-decapping protein 4.
      
 0.455
FAM83F
Protein FAM83F.
      
 0.435
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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