STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SYNJ1Synaptojanin-1. (1570 aa)    
Predicted Functional Partners:
PI4KA
Phosphatidylinositol 4-kinase alpha; Belongs to the PI3/PI4-kinase family.
     
 0.933
SACM1L
Phosphatidylinositide phosphatase SAC1.
    
0.924
INPP4A
Type I inositol 3,4-bisphosphate 4-phosphatase.
     
 0.924
PI4K2A
Phosphatidylinositol 4-kinase type 2-alpha.
     
 0.922
PI4K2B
Phosphatidylinositol 4-kinase type 2-beta.
     
 0.922
PIP5K1C
Phosphatidylinositol 4-phosphate 5-kinase type-1 gamma.
    
 0.912
PIP4K2A
Phosphatidylinositol 5-phosphate 4-kinase type-2 alpha.
    
 0.912
PIP5K1B
Phosphatidylinositol 4-phosphate 5-kinase type-1 beta.
    
 0.912
PTEN
Phosphatase and tensin homolog; Tumor suppressor. Acts as a dual-specificity protein phosphatase, dephosphorylating tyrosine-, serine- and threonine- phosphorylated proteins. Also acts as a lipid phosphatase. Belongs to the PTEN phosphatase protein family.
     
 0.911
INPP4B
Type II inositol 3,4-bisphosphate 4-phosphatase.
     
 0.911
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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