STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GTPBP2GTP-binding protein 2. (608 aa)    
Predicted Functional Partners:
COASY
Bifunctional coenzyme A synthase.
      
 0.672
MRRF
Ribosome-recycling factor, mitochondrial.
      
 0.657
DCAF17
DDB1-and CUL4-associated factor 17.
      
 0.552
PELO
Protein pelota homolog; May function in recognizing stalled ribosomes and triggering endonucleolytic cleavage of the mRNA, a mechanism to release non- functional ribosomes and degrade damaged mRNAs.
    
 
 0.528
HBS1L
HBS1-like protein.
      
0.479
MAP3K14
Mitogen-activated protein kinase kinase kinase 14.
      
 0.470
PCDH7
Protocadherin-7.
      
 0.459
SNORC
Protein SNORC.
      
 0.450
CYP1B1
Cytochrome P450 1B1; Belongs to the cytochrome P450 family.
      
 0.404
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.