Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
SLC24A2Sodium/potassium/calcium exchanger 2; Belongs to the Ca(2+):cation antiporter (CaCA) (TC 2.A.19) family. (650 aa)    
Predicted Functional Partners:
PDE6C
Phosphodiesterase.
      
 0.601
PDE6H
Retinal cone rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit gamma.
      
 0.572
LOC110479909
Homeobox protein Hox-B9a.
      
 0.569
GNG11
Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.
      
 0.555
PDE6B
Phosphodiesterase.
   
  
 0.542
OPN1SW
Ultraviolet-sensitive opsin.
      
 0.531
REEP1
Receptor expression-enhancing protein.
      
 0.526
ACP2
Lysosomal acid phosphatase; Belongs to the histidine acid phosphatase family.
      
 0.519
GUCA1A
Guanylyl cyclase-activating protein 1.
      
 0.514
GET4
Golgi to ER traffic protein 4.
    
   0.505
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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