Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SNTB2Beta-2-syntrophin. (516 aa)    
Predicted Functional Partners:
SNTA1
Alpha-1-syntrophin.
  
 
0.953
SNTB1
Beta-1-syntrophin.
  
  
 
0.902
DMD
Dystrophin; May play a role in anchoring the cytoskeleton to the plasma membrane.
   
 0.849
DAG1
Dystroglycan.
    
 0.847
SGCG
Gamma-sarcoglycan.
     
 0.829
SGCE
Epsilon-sarcoglycan.
    
 0.811
SGCZ
Zeta-sarcoglycan.
     
 0.786
SGCD
Delta-sarcoglycan.
     
 0.786
UTRN
Utrophin; May play a role in anchoring the cytoskeleton to the plasma membrane.
   
 0.774
SNTG1
Gamma-1-syntrophin.
    
0.771
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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