Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SLC4A7Solute carrier family 4 (sodium bicarbonate cotransporter), member 7. (1233 aa)    
Predicted Functional Partners:
VDAC2
Voltage-dependent anion-selective channel protein 2.
      
 0.678
USH1C
Harmonin.
    
 
 0.633
JAG1
Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling.
      
 0.600
CDH23
Cadherin-23.
      
 0.570
ENSLSDP00000020311
annotation not available
      
 0.569
LOXHD1
Lipoxygenase y domain-containing protein 1.
      
 0.569
ANO6
Anoctamin.
   
  
 0.568
MYO3B
Myosin-IIIb; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
      
 0.567
MYO3A
Myosin-IIIa; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
      
 0.567
SMURF1
E3 ubiquitin-protein ligase.
     
 0.560
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.