STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLC32A1Vesicular inhibitory amino acid transporter. (519 aa)    
Predicted Functional Partners:
RIMS2
Regulating synaptic membrane exocytosis protein 2.
   
 
 0.955
SNAP25
Synaptosomal-associated protein; Belongs to the SNAP-25 family.
   
 
 0.725
GAD2
Glutamate decarboxylase 2.
   
 
 0.696
SYT2
Synaptotagmin-2.
   
 
 0.628
SYT1
Synaptotagmin-1.
   
 
 0.628
GAD1
Glutamate decarboxylase 1.
   
 
 0.600
STXBP1
Syntaxin-binding protein 1; Belongs to the STXBP/unc-18/SEC1 family.
   
 
 0.594
ENSLSDP00000013977
annotation not available
   
 
 0.586
SLC18A3
Vesicular acetylcholine transporter.
      
 0.518
SLC17A6
Vesicular glutamate transporter 2.
   
  
 0.518
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.