Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
KIF1BKinesin-like protein KIF1B; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (1146 aa)    
Predicted Functional Partners:
KIF1A
Kinesin-like protein KIF1A; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
  
  
 
0.902
KIF1B-3
Kinesin-like protein KIF1B isoform X1.
 
      0.894
PRC1
Protein regulator of cytokinesis 1.
   
 0.789
HOOK3
Protein Hook 3.
   
 0.656
SALL4
Sal-like protein 4.
      
 0.564
CIT
Citron Rho-interacting kinase; Plays a role in cytokinesis. Displays serine/threonine protein kinase activity; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family.
   
 0.556
USH1C
Harmonin.
      
 0.543
DICER1
Endoribonuclease Dicer; Belongs to the helicase family. Dicer subfamily.
   
 
 0.533
CEP290
Centrosomal protein.
   
 0.533
UCHL5
Ubiquitin carboxyl-terminal hydrolase.
      
 0.524
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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