STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SART1U4/U6.U5 tri-snRNP-associated protein 1. (542 aa)    
Predicted Functional Partners:
PRPF6
Pre-mRNA-processing factor 6.
   
 0.994
SNU13
Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.
    
 0.991
EFTUD2
U5 small nuclear ribonucleoprotein component.
    
 0.991
PRPF3
U4/U6 small nuclear ribonucleoprotein Prp3.
    
 0.991
PRPF8
Pre-mRNA-processing-splicing factor 8.
   
 0.991
ZMAT2
Zinc finger matrin-type protein 2.
    
 0.991
MFAP1
Microfibrillar-associated protein 1.
   
 0.990
PRPF4
U4/U6 small nuclear ribonucleoprotein Prp4.
    
 0.989
SF3B1
Splicing factor 3B subunit 1.
    
 
 0.986
SF3B2
Splicing factor 3B subunit 2.
   
 
 0.986
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.