STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSLSDP00000006093annotation not available (173 aa)    
Predicted Functional Partners:
SLC7A5
Large neutral amino acids transporter small subunit 1.
   
 0.987
SLC7A11
Cystine/glutamate transporter.
   
 0.983
LOC110472953
Cystine/glutamate transporter.
   
 0.954
SLC7A10
Asc-type amino acid transporter 1.
   
 0.896
SLC7A8
Large neutral amino acids transporter small subunit 2.
   
 0.896
SLC7A9
B(0,+)-type amino acid transporter 1.
   
 0.871
SLC7A6
Y+L amino acid transporter 2.
   
 0.853
LOC110477478
Solute carrier family 7 (L-type amino acid transporter), member 6.
   
 0.853
LOC110467985
Rho-related GTP-binding protein RhoB.
   
 0.839
SLC7A13
Solute carrier family 7 member 13.
   
 0.798
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.