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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCATMalonyl-CoA-acyl carrier protein transacylase, mitochondrial. (391 aa)    
Predicted Functional Partners:
OXSM
3-oxoacyl-[acyl-carrier-protein] synthase, mitochondrial; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
 
 0.999
NDUFAB1
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
  
 0.988
PALB2
Partner and localizer of BRCA2.
  
 0.986
FASN
Fatty acid synthase.
  
 0.985
ACACB
Acetyl-CoA carboxylase 2.
  
 
 0.966
ACACA
Acetyl-CoA carboxylase.
  
 
 0.966
ACSF3
Acyl-CoA synthetase family member 3, mitochondrial.
  
 
 0.936
MRPS16
28S ribosomal protein S16, mitochondrial.
  
 
 0.913
ERAL1
GTPase Era, mitochondrial.
  
   0.872
DAP3
28S ribosomal protein S29, mitochondrial.
   
   0.856
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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