STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCDC32Uncharacterized protein C15orf57. (249 aa)    
Predicted Functional Partners:
MRPL32
39S ribosomal protein L32, mitochondrial.
   
 
 0.805
MRPL41
39S ribosomal protein L41, mitochondrial.
   
 
 0.788
MRPL20
39S ribosomal protein L20, mitochondrial; Belongs to the bacterial ribosomal protein bL20 family.
   
 
 0.761
MRPS33
28S ribosomal protein S33, mitochondrial.
   
 
 0.754
CHCHD1
Coiled-coil-helix-coiled-coil-helix domain-containing protein 1.
   
 
 0.751
MRPL40
39S ribosomal protein L40, mitochondrial.
   
   0.742
DAP3
28S ribosomal protein S29, mitochondrial.
   
 
 0.742
MRPL30
39S ribosomal protein L30, mitochondrial.
   
   0.735
MRPL43
39S ribosomal protein L43, mitochondrial.
    
   0.719
MRPS22
28S ribosomal protein S22, mitochondrial.
   
 
 0.719
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.