STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KNL1Kinetochore scaffold 1. (1951 aa)    
Predicted Functional Partners:
WRN
Werner syndrome ATP-dependent helicase.
  
 0.980
BUB1B
Mitotic checkpoint serine/threonine-protein kinase BUB1 beta.
   
 0.972
ENSLSDP00000019602
annotation not available
   
 0.964
NSL1
Kinetochore-associated protein NSL1.
   
 0.949
MIS12
Protein MIS12.
    
 0.935
XRCC3
DNA repair protein XRCC3.
   
 0.914
NUF2
Kinetochore protein Nuf2.
   
 0.876
NDC80
Kinetochore protein NDC80.
   
 0.870
BRCA2
Breast cancer type 2 susceptibility.
   
 0.857
FANCM
Fanconi anemia group M protein.
   
 0.828
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.