STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RAD51_1DNA repair protein RAD51 1. (182 aa)    
Predicted Functional Partners:
BRCA2
Breast cancer type 2 susceptibility.
   
 0.995
BRCA1
Breast cancer type 1 susceptibility.
   
 0.954
XRCC3
DNA repair protein XRCC3.
  
 
 0.949
PALB2
Partner and localizer of BRCA2.
  
 0.945
ENSLSDP00000006170
annotation not available
 
     0.941
RAD52
DNA repair protein RAD52.
    
 0.936
BLM
Bloom syndrome.
  
 0.931
BARD1
BRCA1-associated RING domain protein 1.
   
 0.927
RAD51AP1
RAD51-associated protein 1.
   
 0.925
EXO1
Exonuclease 1.
  
 0.920
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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