STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RAD51_1DNA repair protein RAD51 1. (182 aa)    
Predicted Functional Partners:
BRCA2
Breast cancer type 2 susceptibility.
   
 0.992
ENSLSDP00000006170
annotation not available
 
     0.942
WRN
Werner syndrome ATP-dependent helicase.
  
 0.933
XRCC3
DNA repair protein XRCC3.
  
 
 0.907
EXO1
Exonuclease 1.
  
 0.905
RAD51C
DNA repair protein RAD51 3.
  
 0.904
RPA1
Replication protein A subunit; As part of the heterotrimeric replication protein A complex (RPA/RP-A), binds and stabilizes single-stranded DNA intermediates, that form during DNA replication or upon DNA stress. It prevents their reannealing and in parallel, recruits and activates different proteins and complexes involved in DNA metabolism. Thereby, it plays an essential role both in DNA replication and the cellular response to DNA damage.
  
 0.904
FANCM
Fanconi anemia group M protein.
   
 0.896
LOC110477051
Fanconi anemia group M protein.
   
 0.896
BRCA1
Breast cancer type 1 susceptibility.
   
 0.887
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
Server load: low (34%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.