STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BSDC1BSD domain-containing protein 1. (417 aa)    
Predicted Functional Partners:
GHITM
Growth hormone-inducible transmembrane protein; Belongs to the BI1 family.
   
    0.545
ARL2BP
ADP-ribosylation factor-like protein 2-binding protein.
      
 0.524
SDC1
Syndecan; Cell surface proteoglycan; Belongs to the syndecan proteoglycan family.
      
 0.507
HPSE
Heparanase.
      
 0.463
TMEM97
Sigma intracellular receptor 2.
      
 0.412
EXOC7
Exocyst complex component 7; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane.
      
 0.407
HSDL2
Hydroxysteroid dehydrogenase-like protein 2.
    
 
 0.401
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.