Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SHISAL1Uncharacterized protein KIAA1644. (199 aa)    
Predicted Functional Partners:
PRR5
Proline-rich protein 5.
      
 0.717
PIN4
Peptidyl-prolyl cis-trans isomerase.
      
 0.697
NHSL2
NHS-like protein 2.
      
 0.695
SHISAL2A
Membrane protein FAM159A.
      
 0.678
VOPP1
Vesicular, overexpressed in cancer, prosurvival protein 1.
      
 0.568
WBP1
WW domain binding protein 1.
      
 0.566
LLPH
Protein LLP.
      
 0.565
SHISA3
Protein shisa-3.
      
 0.547
ERCC6
DNA excision repair protein ERCC-6.
      
 0.494
PGM5
Phosphoglucomutase-like protein 5.
      
 0.446
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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