Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
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[Homology]
Score
SMOC2SPARC-related modular calcium-binding protein 2. (455 aa)    
Predicted Functional Partners:
SLC38A4
Sodium-coupled neutral amino acid transporter 4.
      
 0.567
SLC26A5
Prestin.
      
 0.566
CDK14
Cyclin-dependent kinase 14.
      
 0.564
MSANTD1
Myb/SANT-like DNA-binding domain-containing protein 1.
      
 0.549
TDRP
Testis development-related protein.
      
 0.544
MIPOL1
Mirror-image polydactyly gene 1.
      
 0.540
KLHL18
Kelch-like protein 18.
   
  
 0.536
VTI1A
Vesicle transport through interaction with t-SNAREs 1A.
      
 0.531
WDR27
WD repeat-containing protein 27.
      
 0.531
GRXCR1
Glutaredoxin domain-containing cysteine-rich protein 1.
      
 0.529
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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