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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IER3IP1Immediate early response 3-interacting protein 1. (91 aa)    
Predicted Functional Partners:
YIPF5
Protein YIPF.
   
 
 0.659
YIF1B
LOW QUALITY PROTEIN: protein YIF1B.
    
 
 0.633
WDR26
WD repeat-containing protein 26.
      
 0.595
YIPF6
Protein YIPF.
      
 0.543
MAEA
Macrophage erythroblast attacher.
      
 0.526
TMEM167A
Protein kish; Involved in the early part of the secretory pathway. Belongs to the KISH family.
   
   0.521
EBP
3-beta-hydroxysteroid-Delta(8), Delta(7)-isomerase.
      
 0.506
YIPF7
Protein YIPF.
   
 
 0.486
SELENOS
Selenoprotein S.
   
 
 0.480
YIPF4
Protein YIPF.
   
 
 0.477
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.