STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NPRL3Nitrogen permease regulator 3-like protein. (569 aa)    
Predicted Functional Partners:
DEPDC5
DEP domain-containing protein 5.
    
 0.999
WDR24
WD repeat-containing protein 24.
    
 0.999
WDR59
WD repeat-containing protein 59.
    
 0.999
NPRL2
Nitrogen permease regulator 2-like protein.
    
 0.999
MIOS
WD repeat-containing protein mio.
    
 0.998
LOC110467892
Ras-related GTP-binding protein A.
    
 0.997
SEH1L
Nucleoporin SEH1; Belongs to the WD repeat SEC13 family.
    
 0.996
SEC13
Protein SEC13; Belongs to the WD repeat SEC13 family.
    
 0.993
ENSLSDP00000007557
annotation not available
    
 0.980
RRAGD
Ras-related GTP-binding protein D.
    
 0.921
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.